Overview
NameMedtr0055s0130.1
Unique NameMedtr0055s0130.1
TypemRNA
OrganismMedicago truncatula (Barrel Medic)
Sequence length2520
Homology
BLAST of Medtr0055s0130.1 vs. NCBI nr
Match: gi|502153899|ref|XP_004509500.1| (PREDICTED: uncharacterized protein LOC101508810 [Cicer arietinum])
BLAST of Medtr0055s0130.1 vs. NCBI nr
Match: gi|356545511|ref|XP_003541184.1| (PREDICTED: uncharacterized protein LOC100820555 [Glycine max])
BLAST of Medtr0055s0130.1 vs. NCBI nr
Match: gi|356551322|ref|XP_003544025.1| (PREDICTED: uncharacterized protein LOC100800483 [Glycine max])
BLAST of Medtr0055s0130.1 vs. NCBI nr
Match: gi|356545515|ref|XP_003541186.1| (PREDICTED: uncharacterized protein LOC100776198 [Glycine max])
BLAST of Medtr0055s0130.1 vs. NCBI nr
Match: gi|356545632|ref|XP_003541241.1| (PREDICTED: uncharacterized protein LOC100810244 [Glycine max])
BLAST of Medtr0055s0130.1 vs. NCBI nr
Match: gi|502102306|ref|XP_004492032.1| (PREDICTED: uncharacterized protein LOC101513994 [Cicer arietinum])
BLAST of Medtr0055s0130.1 vs. NCBI nr
Match: gi|356545600|ref|XP_003541226.1| (PREDICTED: uncharacterized protein LOC100801180 [Glycine max])
BLAST of Medtr0055s0130.1 vs. NCBI nr
Match: gi|502178471|ref|XP_004516262.1| (PREDICTED: uncharacterized protein LOC101490042, partial [Cicer arietinum])
BLAST of Medtr0055s0130.1 vs. NCBI nr
Match: gi|356551344|ref|XP_003544036.1| (PREDICTED: uncharacterized protein LOC100806341 [Glycine max])
BLAST of Medtr0055s0130.1 vs. NCBI nr
Match: gi|356545503|ref|XP_003541180.1| (PREDICTED: uncharacterized protein LOC100818614 [Glycine max])
The following BLAST results are available for this feature:
BLAST of Medtr0055s0130.1 vs. NCBI nr
Analysis Date: 2014-08-26 (BlastP Analysis)
Total hits: 20
Match NameE-valueIdentityDescription
gi|502153899|ref|XP_004509500.1|2.516980e-13093.43PREDICTED: uncharacterized protein LOC101508810 [C... [more]
gi|356545511|ref|XP_003541184.1|2.975550e-12186.28PREDICTED: uncharacterized protein LOC100820555 [G... [more]
gi|356551322|ref|XP_003544025.1|2.277220e-12085.84PREDICTED: uncharacterized protein LOC100800483 [G... [more]
gi|356545515|ref|XP_003541186.1|4.832640e-9984.26PREDICTED: uncharacterized protein LOC100776198 [G... [more]
gi|356545632|ref|XP_003541241.1|5.301360e-9676.11PREDICTED: uncharacterized protein LOC100810244 [G... [more]
gi|502102306|ref|XP_004492032.1|2.183010e-8369.96PREDICTED: uncharacterized protein LOC101513994 [C... [more]
gi|356545600|ref|XP_003541226.1|7.177000e-8370.40PREDICTED: uncharacterized protein LOC100801180 [G... [more]
gi|502178471|ref|XP_004516262.1|1.316630e-8067.81PREDICTED: uncharacterized protein LOC101490042, p... [more]
gi|356551344|ref|XP_003544036.1|2.819250e-7681.33PREDICTED: uncharacterized protein LOC100806341 [G... [more]
gi|356545503|ref|XP_003541180.1|3.760920e-7584.97PREDICTED: uncharacterized protein LOC100818614 [G... [more]

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Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of M.truncatula2014-08-19
InterPro Annotations2014-08-26
BlastP Analysis2014-08-26
InterPro
Analysis Name: InterPro Annotations
Date Performed: 2014-08-26
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 31..45
score: NAcoord: 231..238
score

Sequences
The following sequences are available for this feature:

mRNA sequence

>Medtr0055s0130.1 ID=Medtr0055s0130.1|Name=Medtr0055s0130.1|organism=Medicago truncatula|type=mRNA|length=2520bp
ATGTCCCGAGCCGATTGGCGGACCGGCACAAACCGTTCCACATCCGACCG
AGACACATCGCCGGCCCCCATCCGCTTCCCTCCCGACAATTTCAAGCACT
CTTTGACTCTCTTTTCAAAGTCCTTTTCATCTTTCCCTCGCGGTACTTGT
TCGCTATCGGTCTCTCGCCAATATTTAGCCTTGGACGGAATTTACCGCCC
GATTGGGGCTGCATTCCCAAACAACCCGACTCGCCGACAGCGCCTCGTGG
TGCGACAGGGTCCGAGCACAACCGGGGCTCTCACCCTCTCCGGCGCCCCT
TTCCAGGGGACTTGGGTCCGGTCCGCCGCTGAGGACGCTTCTCCAGACTA
CAATTCGAACGCCGAGGGCGACCGATTCTCATGGTGGGCTTATCCCGCCC
CGCCTGACCTGAGGTCTCATCACGAGCGTTACAAAACACATGTGGGCAGA
CGTGCCCTCAACCTAATGGCATCGGGCGCAACTTGCGTTCAAAGACTCGA
TGGTTCACGGGATTCTGCAATTCACACCAAGTATCGCATTTCGCTAAGTT
CTTCATCGATGCAAGAGCCTAGATATCCGTTGTCGAGAGTCATTCTATAT
AATGTGTCAAAACACAACACGCACGAAAACCGTCTCCGGTGCCATGCAGG
CATCGACAATGATCCTTCCGCAGGTTCACCTACGGAAACCTTGTTACGAC
TTCTCCTTCCTCTAAATGATAAGGTTCAGTGGACTTCTCACAACGTCGCG
GGCAGCGGACCGCCCACGTCGCCGCAATCCGAACACTTCACCGGACCATT
CAATCGACAAATCGCTCCACCAACTAAGAACGGCCATGCACCACCACCCA
TAGAATCAAGAAAGAGCTCTCAGTCTGTCAATCCTTACTATGTCTGGACC
TGGTCAATAAACATAGCCGTGTTGGTCCCTTCTCGGAAAAACTTGTGCGT
CTCCTTAATTTTCATGCTTAGCGAAGCGGAGTCGGCGTTGTTGGATGCTT
CCATATGCCTGCATGCCTCGGCATTGTGGGGTGTGGGATGTGTTCCGCGA
TGTTGGTTTTTGCAGACGCGAGGGCATGTGAGTGGTAGCGTGGATGTTTG
TGTTTGCTGGCTCAATGCTTTGGCTTTGAACGGTTTAGTCATTAATGGAT
GCTACCTGGTTGATCCTGCCAGTAGTCATATGCTTGTCTCAAAGATTAAG
CCATGCATGTGTAATTATAGTTTGTTTGATGGTATCTACTACTCGGATAA
CCGTAGTAATTCTAGAGCTAATACGTGCAACAAACCCCGACTTTTGGAAG
GGATGCATTTATTAGATAAAAGGTCGACGCAGGCTCTGCCTGTTGCTTTG
ATGATTCATGATAACTCGTCGGATCGCACGGCCCTTGTGTTGGCGACGCA
TCATTCAAATTTCTCTCGTAGTTGGACCTTGGGTTGGGTCGATCGGTCCG
CCTATGGTGTGCACCGGTTGGCTCGTCCCTTCTGCCGGCGATGCGCTCCT
GGCCTTAATTGGCCGGGTCGTGCCTCCGGCGCTGTTACTTTGAAGAAATT
AGAGTGCTCAAAGCAAGATTCTGATCCTATTGTGTTGGCCTTCGGGATCG
GAGTAATGATTAACAGGGACAGTCGGGGACGAACAACTGCGAAAGCATTT
GCCAAGGATGTTTTCATTAATCAAGAACGAAAGTTGGGGGCTCGAAGACG
ATCAGATACCGTCCTAGTCTCAACCATAAACGATGCCGACCAGGGATCAG
CGGATGTTGCTTTTAGGACTCCGCTGGCACCTTATGAGAAATCAAAGTCT
TTGGGTTCCGGGGGGAGTATGGTCGCAAGGCTGAAACTTAAAGGAATTGA
CGGAAGGGCACCACCAGGAGTGGAGCCTGCGCTCTTTCTTGATTCTATGG
GTGGTGGTGCATGGCCGTTCTTAGTTGGTGGAGCGATTTGTCTGGTTAAT
TCCGTTAACGAACGAGACCTCAGCCTGCTAAATAGCTATGTGGAGGTAAC
CCTCCACGGCCAGCTTCTTAGAGGGACTATGGCCATTTGGTGGGAAATAG
GGGGAAATCTTGCTGTTCTTGACTTTGGGCAAGCACAGGCCAAACATGCA
GTTCAACATTTGTTCATGCCTCGTCTTGGCCAAACTTTGTCGTTGTCATG
GAAGAGTAGGATTGATTCATATTTTCCACGTCCCGTCGGAAGGCCCAGCC
ACCAGCGTGGGAAAGAGGGGGTCGTCTTGCCGTTCGTGACTTGGGCAGGC
ACAGGCCAAACATGCAGTTCAACGTTTGTTCATGCCTCGTCTTGGCCAAA
CACTGTCTTGGTCACGGTAAAGCAAAATTTCTGCCTCTTTCTCACGCCGC
CCATGTACGGTGGGGCGGCTAGCGTAGCTAGTAAGAAACCCGTGCACGTC
CCTTCTCGGAAAAACTTGTGCCCTTGTAACGCTGCGGGGCGACTAGCATT
TGCTTACGCAGTGCAGGTCAATAAACATAGCCGTGTTGGTCCCTCCTCGG
AAAAAATTGTGCCCTTGTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
noIPRunintegrated