Overview
NameMedtr0028s0240.1
Unique NameMedtr0028s0240.1
TypemRNA
OrganismMedicago truncatula (Barrel Medic)
Sequence length2403
Homology
BLAST of Medtr0028s0240.1 vs. NCBI nr
Match: gi|502176840|ref|XP_004515950.1| (PREDICTED: uncharacterized protein LOC101505536 [Cicer arietinum])
BLAST of Medtr0028s0240.1 vs. NCBI nr
Match: gi|502146303|ref|XP_004506394.1| (PREDICTED: uncharacterized protein LOC101493015 [Cicer arietinum])
BLAST of Medtr0028s0240.1 vs. NCBI nr
Match: gi|502137386|ref|XP_004503067.1| (PREDICTED: MICAL-like protein 1-like [Cicer arietinum])
BLAST of Medtr0028s0240.1 vs. NCBI nr
Match: gi|502166827|ref|XP_004513990.1| (PREDICTED: serine/arginine repetitive matrix protein 1-like [Cicer arietinum])
BLAST of Medtr0028s0240.1 vs. NCBI nr
Match: gi|502096837|ref|XP_004490842.1| (PREDICTED: uncharacterized protein LOC101508725 [Cicer arietinum])
BLAST of Medtr0028s0240.1 vs. NCBI nr
Match: gi|502093982|ref|XP_004490110.1| (PREDICTED: uncharacterized protein LOC101513436 [Cicer arietinum])
BLAST of Medtr0028s0240.1 vs. NCBI nr
Match: gi|502121359|ref|XP_004497285.1| (PREDICTED: histone-lysine N-methyltransferase MLL2-like [Cicer arietinum])
BLAST of Medtr0028s0240.1 vs. NCBI nr
Match: gi|502094981|ref|XP_004490343.1| (PREDICTED: uncharacterized protein LOC101488484 [Cicer arietinum])
BLAST of Medtr0028s0240.1 vs. NCBI nr
Match: gi|502129824|ref|XP_004500437.1| (PREDICTED: uncharacterized protein LOC101500968 [Cicer arietinum])
BLAST of Medtr0028s0240.1 vs. NCBI nr
Match: gi|502147842|ref|XP_004506937.1| (PREDICTED: uncharacterized protein LOC101490320 [Cicer arietinum])
The following BLAST results are available for this feature:
BLAST of Medtr0028s0240.1 vs. NCBI nr
Analysis Date: 2014-08-26 (BlastP Analysis)
Total hits: 20
Match NameE-valueIdentityDescription
gi|502176840|ref|XP_004515950.1|2.964770e-5841.02PREDICTED: uncharacterized protein LOC101505536 [C... [more]
gi|502146303|ref|XP_004506394.1|1.437410e-5736.33PREDICTED: uncharacterized protein LOC101493015 [C... [more]
gi|502137386|ref|XP_004503067.1|1.924010e-5536.57PREDICTED: MICAL-like protein 1-like [Cicer arieti... [more]
gi|502166827|ref|XP_004513990.1|5.186210e-5540.76PREDICTED: serine/arginine repetitive matrix prote... [more]
gi|502096837|ref|XP_004490842.1|8.102820e-5537.83PREDICTED: uncharacterized protein LOC101508725 [C... [more]
gi|502093982|ref|XP_004490110.1|8.590190e-5537.83PREDICTED: uncharacterized protein LOC101513436 [C... [more]
gi|502121359|ref|XP_004497285.1|2.457500e-5441.86PREDICTED: histone-lysine N-methyltransferase MLL2... [more]
gi|502094981|ref|XP_004490343.1|7.897670e-5338.87PREDICTED: uncharacterized protein LOC101488484 [C... [more]
gi|502129824|ref|XP_004500437.1|3.333730e-5240.67PREDICTED: uncharacterized protein LOC101500968 [C... [more]
gi|502147842|ref|XP_004506937.1|2.081130e-5139.67PREDICTED: uncharacterized protein LOC101490320 [C... [more]

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Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of M.truncatula2014-08-19
InterPro Annotations2014-08-26
BlastP Analysis2014-08-26
InterPro
Analysis Name: InterPro Annotations
Date Performed: 2014-08-26
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 12..40
score: NAcoord: 76..88
score: NAcoord: 211..252
score: NAcoord: 313..328
score: NAcoord: 741..773
score: NAcoord: 776..792
score

Sequences
The following sequences are available for this feature:

mRNA sequence

>Medtr0028s0240.1 ID=Medtr0028s0240.1|Name=Medtr0028s0240.1|organism=Medicago truncatula|type=mRNA|length=2403bp
ATGGCTCGAACCAAGGGAACCGGAAAAACCAACCCAGATGACTCTTCTCC
TTCACCATCACCAACCCGTTCTCCTTCTCCACCATCTCCTCCGGTGACAA
AACCGCCGTCATCTCCTCCTCTGTTCGATTCAACTCCACCATCAACCAAG
GAAACCACTCCATTCGTAACTCCACCACAATCTCCGCTCAATAACTCCAC
AGAACCAATCATGCAAGATGGATATCTCACCACCGAAACCACACCAGAAA
AAACTCCATTAAAGGACGACGAAAAACTTCCCTTCATCCCTGACCCTGAA
TCCTTCCATCCTCTCGCGATGGTACTCTACGTTGAACCAAAACCAACTTC
GGTCAACCTAAATCTCAACACACCAAGAATAGTTGTTGAAGATCAACCAA
CCGCTCCTCAGGAACCTCCAAACTTGAACAAAATGGCTCCTCATCTCAGG
AACATGACCAAAAGGAAGTTGCCTCCCAAGAAGGCTAAATCTGCTCCTAA
TCCAAGACCTAGAAAATCTCAAAGGCTTCGTTCTGCAGTTGGAACAAAGA
AAACCAACAGTGTAGACACAACTGTACATGATATCTCTGATTCAGATGAA
GAAACTGAACCAACTACCCCTTTGGCTGAGAAAACTCCTTCTCCTCTTAA
GCCCAAACCTAAGAGTAACAAAAAGGTCTCTAAACCTCCTATCAAGGGTT
CTGTACCAAAACCAAAGCCTAAACCAACTGTGAAGGACAAAGGAAAGCAG
AAGCAAACTGCTCAACCAGAACGTTCTTCAGAAAAATGTTCTCCAAAGCG
CAAAAATCCTTCAAAACAGAAGATCATTCATATCTCTACAGGAAAGAGAG
TACCTCTGTTTGATCATTCTCTGAAAAAGGATTTCAAAGAAAAATGGGGA
AATAGGTCAATTGGAATTGGAAGGTATTATGATTTTGTCAAGCTGGAAAA
AGACAAAGTCGTTCTTAAGGAGTATGTTGATGAGCAAGGCTGGACCAAAT
TTCTACAGCTTCGTGAGAGACACTACCCAAAGCTTGTCCAAGCTTTCTAT
TTCATGGCAGAAGCATACCCTGAGGAAAGCTTAATAGTGTCTAGGATTAA
GGATGTTGAGATACGTCTCACTCCACAGGTAATCTCTGATACTCTTGGTA
TCTCAAATTCTGGTCAAACTGTCTTTGGTGATGATTGGTTTGAAAAACTT
GAAGTCAATTCTGAAAATGTTTACAAACTCCTTTTCAAACCAAATGTCAC
TGAGTTTGTTTCTTCGAACCTTCTGCCAACCCCAAAAATGCTGAATGGCA
TAAGCCAACATTGTGTCTTGCCTAGAAATGGTAATTTTCAACATGTTAGT
TCAAATGATCTCTTGGTCATGTATCATCTTTTAATGAAAGAAAAATTGAG
TCTTCCTCATATCATTATTCATAACATGATCAATGTTATTCAGTCTCGTA
ACAAAAAGTCTTGTCTGCCATATGGAATGGCTCTGACCAAAATCTTCATT
AAAAATCATATTCCTTTTGAAGGTGAAAAATCTGTTTTTGAGTATTCTCA
ATTCACTCCAAAAAATCTGAGTCACATGAAGCAGGAACCTGTTGATGAGC
CTCCTTCTGACCTCAAAAGAAAGAGGGAAGATGGGTCTGATCTGCAGAAT
CCAGTTCCAGAAAATGCTTCTGATGAACACTGCAATCCTCCAGAACGTTC
TTCAGAACGTTCTCCTGTGATGGAGGAAGATCAGGAACTGCTTGAAAACT
TTGGCAATCATGCTTCTCTGTCAAAAGTCAAAGCTTCAGAAATTCTTCAA
AGTTTCACTGAAAAAACCCCAATCACAAAACCTTCAAAATTGTTCATCTC
TCCTCAAAAGCATGATTATTCTGCTTTGTTTCAATCTGACTCAGTGGACA
AATTCTTTGTTCCACAAGCTTTTGATTCATCTGTCCAGATGGACTCTCTC
AGGTCTCTTCAAACTAATCTCTCTTTTCCTTCAAGATTCAATGAATCTCC
TTCAATGGCGCAAAGGATTTTTGAGCACAATGAAAGGCCAACCAAAAGGA
CCAAGGTTGAGAAAGACTGCAGTAAGACACGCAGTGACTTGACTAGGGTA
ATTGAAGGGAACAATGCAATTTTGCATTATCTGTCTTGGATGACTTTTGA
AATGTCTCTGTCAAGGAAGTGGAAGGACTCCATAAGTGACAAGAATGAGT
TTGCTAGACCAGAACAAAACCCATTCCCAGTTCCTATGTATCCCATGTTC
ATGCCTACTATCTCTTCATCATCTGATGCCTCTTCTCCAACCATTCCACC
TACTGCTGCTGCTGCCCCTTTTCATGATGACAAAGGGGGAGATGATTTAG
GGGATTATGAGTTAGGAGGACCAGGAAAACAGTTAGGATCTAGGGAAGAA
TAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
noIPRunintegrated