Overview
NameMedtr0024s0170.1
Unique NameMedtr0024s0170.1
TypemRNA
OrganismMedicago truncatula (Barrel Medic)
Sequence length1449
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0009058 biosynthetic process
biological_process GO:0008152 metabolic process
biological_process GO:0010025 wax biosynthetic process
biological_process GO:0010166 wax metabolic process
cellular_component GO:0005623 cell
cellular_component GO:0044464 cell part
cellular_component GO:0071944 cell periphery
cellular_component GO:0005575 cellular_component
cellular_component GO:0016020 membrane
cellular_component GO:0005886 plasma membrane
molecular_function GO:0008374 O-acyltransferase activity
molecular_function GO:0016411 acylglycerol O-acyltransferase activity
molecular_function GO:0003824 catalytic activity
molecular_function GO:0004144 diacylglycerol O-acyltransferase activity
molecular_function GO:0047196 long-chain-alcohol O-fatty-acyltransferase activity
molecular_function GO:0003674 molecular_function
molecular_function GO:0016740 transferase activity
molecular_function GO:0016746 transferase activity, transferring acyl groups
molecular_function GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups
PFam
Analysis Name: PFAM Analysis
Date Performed: 2014-08-26
PFAM TermGenome CoordinatesProtein CoordinatesDomain Coordinatesdomain_scoreexpected_domaintotal_scoreexpected_whole
PF03007.1173330-72848102-26297-26345.01.3e-1546.04.2e-12
PF06974.872691-72242315-4644-15196.81.4e-3197.74.8e-28

Homology
BLAST of Medtr0024s0170.1 vs. NCBI nr
Match: gi|502180628|ref|XP_004516681.1| (PREDICTED: O-acyltransferase WSD1-like [Cicer arietinum])
BLAST of Medtr0024s0170.1 vs. NCBI nr
Match: gi|502180632|ref|XP_004516682.1| (PREDICTED: O-acyltransferase WSD1-like [Cicer arietinum])
BLAST of Medtr0024s0170.1 vs. NCBI nr
Match: gi|356545712|ref|XP_003541280.1| (PREDICTED: O-acyltransferase WSD1-like [Glycine max])
BLAST of Medtr0024s0170.1 vs. NCBI nr
Match: gi|359806773|ref|NP_001241558.1| (uncharacterized protein LOC100777968 [Glycine max] >gi|255635441|gb|ACU18073.1| unknown [Glycine max])
BLAST of Medtr0024s0170.1 vs. NCBI nr
Match: gi|502180624|ref|XP_004516680.1| (PREDICTED: O-acyltransferase WSD1-like [Cicer arietinum])
BLAST of Medtr0024s0170.1 vs. NCBI nr
Match: gi|502180659|ref|XP_004516688.1| (PREDICTED: O-acyltransferase WSD1-like [Cicer arietinum])
BLAST of Medtr0024s0170.1 vs. NCBI nr
Match: gi|255553705|ref|XP_002517893.1| (conserved hypothetical protein [Ricinus communis] >gi|223542875|gb|EEF44411.1| conserved hypothetical protein [Ricinus communis])
BLAST of Medtr0024s0170.1 vs. NCBI nr
Match: gi|225446392|ref|XP_002274522.1| (PREDICTED: O-acyltransferase WSD1 [Vitis vinifera])
BLAST of Medtr0024s0170.1 vs. NCBI nr
Match: gi|590690837|ref|XP_007043617.1| (O-acyltransferase family protein [Theobroma cacao] >gi|508707552|gb|EOX99448.1| O-acyltransferase family protein [Theobroma cacao])
BLAST of Medtr0024s0170.1 vs. NCBI nr
Match: gi|224140677|ref|XP_002323705.1| (predicted protein [Populus trichocarpa])
The following BLAST results are available for this feature:
BLAST of Medtr0024s0170.1 vs. NCBI nr
Analysis Date: 2014-08-26 (BlastP Analysis)
Total hits: 20
Match NameE-valueIdentityDescription
gi|502180628|ref|XP_004516681.1|0.000000e+082.20PREDICTED: O-acyltransferase WSD1-like [Cicer arie... [more]
gi|502180632|ref|XP_004516682.1|0.000000e+078.32PREDICTED: O-acyltransferase WSD1-like [Cicer arie... [more]
gi|356545712|ref|XP_003541280.1|0.000000e+072.63PREDICTED: O-acyltransferase WSD1-like [Glycine ma... [more]
gi|359806773|ref|NP_001241558.1|0.000000e+073.61uncharacterized protein LOC100777968 [Glycine max]... [more]
gi|502180624|ref|XP_004516680.1|0.000000e+067.24PREDICTED: O-acyltransferase WSD1-like [Cicer arie... [more]
gi|502180659|ref|XP_004516688.1|0.000000e+066.81PREDICTED: O-acyltransferase WSD1-like [Cicer arie... [more]
gi|255553705|ref|XP_002517893.1|0.000000e+061.30conserved hypothetical protein [Ricinus communis] ... [more]
gi|225446392|ref|XP_002274522.1|0.000000e+058.48PREDICTED: O-acyltransferase WSD1 [Vitis vinifera][more]
gi|590690837|ref|XP_007043617.1|0.000000e+059.07O-acyltransferase family protein [Theobroma cacao]... [more]
gi|224140677|ref|XP_002323705.1|0.000000e+057.08predicted protein [Populus trichocarpa][more]

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Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of M.truncatula2014-08-19
InterPro Annotations2014-08-26
BlastP Analysis2014-08-26
PFAM Analysis2014-08-26
PhyloFun GO Analysis2014-08-26
InterPro
Analysis Name: InterPro Annotations
Date Performed: 2014-08-26
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 71..85
score

Sequences
The following sequences are available for this feature:

mRNA sequence

>Medtr0024s0170.1 ID=Medtr0024s0170.1|Name=Medtr0024s0170.1|organism=Medicago truncatula|type=mRNA|length=1449bp
ATGGAAGGATTTGAGGAAGAAATTGAAGAGCCAGTGAGTCCAACAGGGCA
ATATTTGAATAGCTCTTCCTTAAGTGTGTGCATTTTAGGTGTTTTAGAAT
CTGAGATTTCAATATCTATAGATGATAACCAAACCTTGTCACTTCTTAAC
AATGTATTCCTTCCTATCAGCACTCGTTTTTCATCCATCATGATTAAGGA
CCACAATGGAGAGAAAAAATGGAAGAAAGTTGATGTCAAAGTAGAGGATC
ATGTATACATTCCTATGTTTCCCACTAGCAAATCATCACTCTATGATGAA
TATCTTGATGATTATATGTCAAAAATAGCAATGGAACATTTACCACAAGA
TAGACCACTATGGGAAATTCATATTATTAAATATCCAACAAAAAATGCAG
CTGGTACCTTAGTATTCAAACTTCATCATGCACTTGGAGATGGTTACTCT
CTAATGGGAGCTCTTCTATCATGTTTAGAAAGAGCTGATAACCCTTTTCT
TCCATTCACATTACCATCAAGTAAAATTAGACCTAAATCAATTTTTAATA
CCAAAGCATTTTTCAAGAGATCATTTCCCTCAATTTTCTCCAAAGTATTT
GATACTATATCTGATTTTGGATGGAGTATGTTAAAAAGTAGTTTGGTTGA
AGATGATGTAACACCAATTAGGTCTTGTGAGGATGATATCAAGCTAAGGA
AAATTAATATCTCAAGTGTCTCATTCTCTATGGATCGCATCAAAGAAGTG
AAATCAAGACTTGGAGTGAGCACAAATGATGTGATTGCTGGTCTAATTTT
CTTTGGAATTCGACTATACATGCACCAAATGAATCAAGATTCAAGCAAAA
ATCAATCCACAGCATTGGTTTTATTGAATACAAGAAACATTGGAGGTTAT
AAGTCAGTTAAGGAGATGGTTGACATTAAGAACAATAATGATGGTTCAGC
TTGGGGAAATCAATTTGCATTTTTGCATGTTTCAATTCCAAAGCTAAGTG
ACAAAAAATATGAAAATCCAATTGAATTTATATGGGAAGCTCATAAAGAA
ATCAACAGGAAGAAAAATTCCTTGGCCACACCTCTTACTGGTATGATCTT
AAATATGGTGAAGAAATTGAGAGGCCCCGAGGCTTCAGCCAAATTTGTAT
ACAACACTTTGAGAAATTCAAGCACAACAATTTCCAACATAATTGGACCA
ATGGAGCAAATGGCTTTGGCTAATCATCCAATTAAAGGACTATATTTTAT
GGTTGTTGGTCCACCAGAGAGTCTAACCATAACCATTATGAGCTACATGG
GAAAGTTAAGAATTGCATTTGGATTGGAGAAAGACTTTATTGACAAGCAA
AAATTCATTTCATGCATGGAGAGTTCTCTTGAGATGATAATTACAGCAGC
AAGAAAGATTTCCATCAAAGAAAACATATTTCCACTACATTATTGTTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
noIPRunintegrated
Vocabulary: Cellular Component
TermDefinition
GO:0005886plasma membrane
GO:0005575cellular_component
GO:0016020membrane
GO:0005623cell
GO:0044464cell part
GO:0071944cell periphery
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
GO:0008150biological_process
GO:0009058biosynthetic process
GO:0010025wax biosynthetic process
GO:0010166wax metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0003674molecular_function
GO:0003824catalytic activity
GO:0004144diacylglycerol O-acyltransferase activity
GO:0008374O-acyltransferase activity
GO:0016411acylglycerol O-acyltransferase activity
GO:0016740transferase activity
GO:0016746transferase activity, transferring acyl groups
GO:0016747transferase activity, transferring acyl groups other than amino-acyl groups
GO:0047196long-chain-alcohol O-fatty-acyltransferase activity